🟣eScience Center Software Directory
eScience Center Software Directory
1
JASP modules app
A web application that allows you to search/filter all the available JASP modules and install them.
statistical software · webapp · modules
2
PlanEO Dashboard
Provides an interactive interface for visualizing geographical data relevant to the MINE‑DD project.
demography · gis · interactive dashboard · visualization
3
TulipaClustering.jl
Cluster profiles into representative periods.
clustering · energy system analysis · Julia · open source tool
4
TulipaIO.jl
A Julia package relying on DuckDB to tie a variety of data sources with Julia (part of the Tulipa energy modelling ecosystem).
Julia · data integration · DuckDB · energy modelling
5
TulipaEnergyModel
Provides an optimisation model for the electricity market and its coupling with other systems.
energy system modelling · sector coupling · open source tool
6
QANS
“Questionnaire And Nomination Software” — a collection of software components to enable peer nomination and survey workflows.
peer nomination · survey · sociology · open source
7
RESTful APE
A Java REST API for the APE (Automated Pipeline Explorer) library; supports workflow technologies and REST services.
Java · REST API · workflow technologies
8
mkdocs rich argparse
An mkdocs plugin to generate documentation for a “rich argparse” parser; renders commands, sub‑commands and arguments in MkDocs.
Python · documentation · CLI tooling
9
Effort Sharing
Analysis and plotting scripts for effort sharing, associated with the Carbon Budget Explorer.
data analysis · Python · carbon budget · visualization
10
Open Matrices Stimulus Set (omss)
A Python package for generating matrix‑reasoning puzzles, inspired by Raven’s Progressive Matrices.
intelligence · matrices · Python · stimuli generation
11
Climate Rapid Evaluation Framework
Rapid evaluation framework for climate simulations.
big data · climate modelling · open source
12
Cosimplat
A co‑simulation framework developed for the RESCUE project.
co‑simulation · energy systems · open source
13
KMM
Lightweight C++ middleware for accelerated computing.
GPU · high performance computing
14
Kernel Float
C++ header‑only library for CUDA that simplifies working with vector types and reduced precision.
AI · GPU · big data
15
ccglib
The Complex Common GEMM Library (ccglib) provides mixed‑precision matrix‑matrix multiplication kernels.
CUDA · GPU · HPC
16
protein‑quest
Python package to search/retrieve/filter proteins and protein structures.
bioinformatics · proteins · Python
17
visor
A set of tools for visibility analysis.
geospatial · GIS · isovist · R
18
rcoins
Identify continuous lines in a spatial network.
geospatial · networks · R
19
rcrisp
Tools to automate the morphological delineation of riverside urban areas.
data analysis · geospatial · R · urban rivers
20
seahtrue
Processes XF analyser data on oxygen consumption and acidification from Agilent Wave .xls files.
metabolism · bioconductor · R · seahorse
21
CLASS‑web
Implementation of the CLASS (Chemistry Land‑surface Atmosphere Soil Slab) model that runs entirely as a web service.
web service · climate modelling
22
Verticox+
A Cox proportional hazards algorithm for vertically distributed data.
federated learning · Java · privacy preserving analysis
23
H2 scenario preprocessing
Preprocessing script to create a database for the H2 scenario explorer.
data processing · energy transition · renewable energy
24
H2 scenario explorer
Web application to visualize hydrogen production scenarios (HyChain WP1).
energy transition · renewable energy · visualization
25
Cronian
Python package for building copper plate optimisation models in Pyomo.
optimisation · Python · energy
26
Tilburg University Coding Café
Materials for Tilburg University’s Coding Café: community learning materials and presentations in Python & R.
community · learning materials · Python · R
27
rcrisp Shiny app
A Shiny web‑app for the “rcrisp” package which automates the morphological delineation of riverside urban areas.
geospatial · R · shiny · webapp
28
INA tool
A web tool for visualising and analysing Institutional Statements using multilayer network visualisation.
multilayer networks · visualization
29
snakemake‑storage‑plugin‑rucio
A Snakemake storage plugin to handle files via the Rucio (data management for large scale) system.
rucio · snakemake · data management
30
CoeusAI
A QGIS plugin designed for exploration of multiband geospatial datasets, combining deep learning and classical ML.
deep learning · gis · machine learning · Python
31
protein‑detective
A Python package to detect proteins within electron‑microscopy density maps.
Python · macromolecular structure · cryo‑EM
32
haddock3
HADDOCK3: Modular software for integrative modelling of biomolecular complexes and docking.
biomolecular complexes · docking · integrative modelling
33
classmodel/form
A JSON‑schema rendering “form” component using Solid UI components for web interfaces.
web component · JSON schema · UI development
34
ESMValCore
Core functionality for the ESMValTool: community diagnostics & performance metrics for earth‑system models.
big data · visualization · workflow technologies
35
ESMValTool
Comprehensive suite for evaluation of earth‑system models covering diagnostics and performance metrics.
big data · optimized data handling · visualization
36
Springtime
Spatiotemporal phenology research with interpretable models.
geospatial · machine learning · phenology
37
OpenDA
A software framework and toolkit for data assimilation and model execution in environmental sciences.
data assimilation · environmental modelling · open source
38
Netherlands eScience Center Python Template
Generic template for Python packages so you can spend less time setting up and configuring new packages and comply with the centre’s Software Development Guide.
software template · Python · project setup
39
Teachbook Recombiner
Web app to pick chapters from a predefined list of TeachBooks and combine them into a new book using an online UI.
web application · education · book generation
40
Rucio Policy Package for KM3NeT
Package with custom policies for the KM3NeT Collaboration’s Rucio instance (data‑management).
big data · data management · high performance computing
41
Mahiru
Platform to support machine‑learning experiments, tracking of datasets and workflows.
machine learning · workflow tracking · Python
42
Haddock3 UI
Web interface for the HADDOCK3 integrative modelling platform for biomolecular complexes.
biomolecular modelling · docking · web interface
43
Protein‑Quest
Python package to search/retrieve/filter proteins and protein structures.
bioinformatics · proteins · Python
44
ClassModel/Form
A JSON‑schema rendering “form” component using Solid UI components for web interfaces.
web components · JSON schema · UI development
45
CoeusAI
A QGIS plugin designed for exploration of multiband geospatial datasets, combining deep learning and classical ML.
deep learning · GIS · machine learning · Python
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