🔵Biomedical Repositories

Biomedical Data Repositories

Biomedical Data Repositories for reNEW Researchers

The following data repositories have been carefully selected to address the diverse needs of bioinformatics research within the reNEW community. Each repository is rigorously curated and regularly updated, ensuring researchers can access the most accurate and current data. By incorporating these resources into their work, reNEW researchers can significantly enhance the quality, depth, and impact of their work.

Array Express: functional genomics data

BioImage Archive: bioimaging data

BioModels: computational models

BioSamples: reference sample data

BioStudies: biological research data

ChEBI: chemical entities

DGVa: structural genetic variation data

EFO: experimental variables

EGA: human data that requires controlled access

EMPIAR: raw image data

ENA: nucleotide sequence data

EVA: genetic variation data

GEO: Gene Expression Omnibus

GO: Gene ontology annotations

GWAS Catalog: Genome-wide association study data

IntAct: molecular interactions

IntEnz: enzyme nomenclature

MetaboLights: metabolomics data

Metagenomics: raw sequence data & associated metadata

OneDep: electron microscopy, X-ray crystallography & NMR data

PRIDE: protein & peptide identification data

UniProt SPIN: protein sequences & annotations

UniProt: updates or corrections